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FASTLINK - 'Fastlink' versions of the original LINKAGE packageVITESSE - Rapid Multipoint Likelihood CalculationAPM - Affected Pedigree Member method programsSIMWALK2 - Multipoint analyses using simulated annealingSPLINK - Linkage analysis using affected sib pairsSIMIBD - Statistics of shared markers of affected relativesGENEHUNTER - Multipoint analysis of pedigree dataMERLIN - Multipoint Engine for Rapid Likelihood Inference
Association and TDT ...TRANSMIT - Tests association of marker and diseaseUNPHASED - Association and TDT for haplotypes
Miscellaneous Linkage Programs ...GENEHUNTER-PLUS - Modification of genehunterSNPHAP - Haplotype frequency estimation
Linkage Utilities ...QUIKLINK - Alternative to LCPMEGA2 - Linkage file format conversion utility
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